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ARCA (Synonyms: Anti Reverse Cap Analog, 3´-O-Me-m7G(5')ppp(5')G)

Katalog-Nr.GC16608 Copy One-Click Copy Product Info

Anti-Reverse Cap Analog (ARCA) ist ein modifiziertes Cap-Analog, bei dem die 3'-OH-Gruppe (näher an m7G) durch -OCH3 ersetzt ist.

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ARCA Chemische Struktur

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10 µl (100 mM)
80,00 $
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50 µl (100 mM)
400,00 $
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100 µl (100 mM)
600,00 $
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Sample solution is provided at 25 µL, 10mM.



Description of ARCA

Anti-Reverse Cap Analog (ARCA) ist ein modifiziertes Cap-Analog, bei dem die 3'-OH-Gruppe (näher an m7G) durch -OCH3 ersetzt ist. Aufgrund dieser Substitution kann die RNA-Polymerase die Transkription nur mit der verbleibenden Hydroxylgruppe einleiten und den Einbau von ARCA in der Vorwärtsrichtung erzwingen. ARCA sorgt also nur für den Einbau in der Vorwärtsrichtung. Deshalb sind 100%der mit ARCA am 5'-Ende synthetisierten Transkripte übersetzbar, was zu einer starken stimulierenden Wirkung auf die Translation führt.

References:
[1].Janowski M, et al. The legacy of mRNA engineering: A lineup of pioneers for the Nobel Prize. Mol. Ther. Nucleic Acids. 2022 Sep 13; 29: 272-284.

Protocol of ARCA

Method for preparing correctly oriented cap-structured mRNA using ARCA[1]

This protocol is for reference only. Please adjust according to actual needs.

(1) Reagent preparation: dissolve ARCA in water or appropriate buffer to prepare a 0.5mM stock solution. Prepare an NTP mixture containing 0.5mM ATP, 0.5mM CTP, 0.5mM UTP and 0.1mM GTP (ARCA to GTP molar ratio 5:1). Prepare SP6 or T7 RNA polymerase, DNA template, RNase inhibitor and transcription buffer.

(2) In vitro transcription reaction system construction: add 600ng DNA template, 1U/μL RNase inhibitor, 0.5mM ATP/CTP/UTP, 0.1mM GTP and 0.5mM ARCA to the transcription buffer. Add SP6 or T7 RNA polymerase.

(3) mRNA synthesis: incubate at 37°C for 1 hour. Add 2μL DNase and incubate at 37°C for 20 minutes to remove template DNA. Purify the RNA product to obtain ARCA cap-structured mRNA with correct orientation.

(4) Translation verification of ARCA-capped mRNA: transfect ARCA-capped mRNA into HEK293 cells (DMEM+10%FBS; 37°C; 5%CO2), or add rabbit reticulocyte lysate and incubate at 30°C for 60 minutes. Evaluate translation efficiency by luciferase luminescence values. Detect remaining mRNA proportion in HEK293 cells by RT-qPCR to evaluate stability.

Precautions:

(1) To prevent RNA degradation, use RNase-free consumables throughout the experiment and perform operations on ice.

(2) For your safety and health, wear laboratory coats and disposable gloves during operation.

References:

[1] Kocmik I, Piecyk K, Rudzinska M, et al. Modified ARCA analogs providing enhanced translational properties of capped mRNAs. Cell Cycle. 2018;17(13):1624-1636.

Chemical Properties of ARCA

Cas No. SDF
Überlieferungen Anti Reverse Cap Analog, 3´-O-Me-m7G(5')ppp(5')G
Canonical SMILES OC1C(COP([O-])(OP([O-])(OP([O-])(OCC2OC(N3C=[N+](C)C4=C3N=C(N)NC4=O)C(O)C2OC)=O)=O)=O)OC(N5C=NC6=C5N=C(N)NC6=O)C1O
Formula C22H32N10O18P3 (free acid) M.Wt 817.4 g/mol (free acid)
Löslichkeit Storage Store at -20°C
Shipping Condition Evaluation sample solution: shipped with blue ice. All other sizes available: with RT, or with Blue Ice upon request.

Complete Stock Solution Preparation Table of ARCA

Prepare stock solution
1 mg 5 mg 10 mg
1 mM 1.2234 mL 6.117 mL 12.2339 mL
5 mM 244.7 μL 1.2234 mL 2.4468 mL
10 mM 122.3 μL 611.7 μL 1.2234 mL
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In vivo Formulation Calculator (Clear solution) of ARCA

Step 1: Enter information below (Recommended: An additional animal making an allowance for loss during the experiment)

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Method for preparing DMSO master liquid: mg drug pre-dissolved in μL DMSO ( Master liquid concentration mg/mL, Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug. )

Method for preparing in vivo formulation: Take μL DMSO master liquid, next addμL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL saline, mix and clarify.

Method for preparing in vivo formulation: Take μL DMSO master liquid, next add μL Corn oil, mix and clarify.

Note: 1. Please make sure the liquid is clear before adding the next solvent.
2. Be sure to add the solvent(s) in order. You must ensure that the solution obtained, in the previous addition, is a clear solution before proceeding to add the next solvent. Physical methods such as vortex, ultrasound or hot water bath can be used to aid dissolving.
3. All of the above co-solvents are available for purchase on the GlpBio website.

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Average Rating: 5 ★★★★★ (Based on Reviews and 31 reference(s) in Google Scholar.)

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