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CFDA-SE (Synonyms: 5(6)Carboxyfluorescein diacetate succinimidyl ester, 5(6)-CFDA N-succinmidyl ester)

Catalog No.GC14056 Copy One-Click Copy Product Info

CFDA-SE is a cell-permeable fluorescent dye that undergoes irreversible covalent binding to free amine groups of intracellular cytoskeletal proteins and releases green fluorescence upon hydrolysis.

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CFDA-SE Chemical Structure

Cas No.: 150347-59-4

Size Price Stock Qty
10mg
$40.00
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25mg
$84.00
In stock
50mg
$164.00
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100mg
$339.00
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Sample solution is provided at 25 µL, 10mM.



Product has been cited by 5 publications

Description of CFDA-SE

CFDA-SE is a cell-permeable fluorescent dye that undergoes irreversible covalent binding to free amine groups of intracellular cytoskeletal proteins and releases green fluorescence upon hydrolysis[1,2]. The fluorescence of CFDA-SE is evenly distributed to daughter cells upon cell division, with the fluorescence intensity halving at each division, and its attenuation is proportional to the number of cell divisions[3,4]. CFDA-SE can be detected at an Ex/Em wavelength of 488/518nm and is commonly used for cell proliferation assays and live-cell tracing[5,6,7]."

Reference:

[1] Morales‐Kastresana A, Welsh J A, Jones J C. Detection and sorting of extracellular vesicles and viruses using nanoFACS[J]. Current protocols in cytometry, 2020, 95(1): e81.

[2] Ender F, Zamzow P, von Bubnoff N, et al. Detection and quantification of extracellular vesicles via FACS: Membrane labeling matters![J]. International journal of molecular sciences, 2019, 21(1): 291.

[3] Wu C X, Zou Q, Zhu Z Y, et al. Intrahepatic transplantation of hepatic oval cells for fulminant hepatic failure in rats[J]. World journal of gastroenterology: WJG, 2009, 15(12): 1506.

[4] Duan X M, Huang J, Ma H X, et al. A flow cytometric assay for simultaneously measuring the proliferation and cytotoxicity of cytokine induced killer cells in combination with carboxyfluorescein succinimidyl ester (CFSE) labeling[J]. African Journal of Biotechnology, 2011, 10(65): 14598.

[5] WANG X Q, DUAN X M, LIU L H, et al. Carboxyfluorescein diacetate succinimidyl ester fluorescent dye for cell labeling[J]. Acta biochimica et biophysica Sinica, 2005, 37(6): 379-385.

[6] Urbani S, Caporale R, Lombardini L, et al. Use of CFDA-SE for evaluating the in vitro proliferation pattern of human mesenchymal stem cells[J]. Cytotherapy, 2006, 8(3): 243-253.

[7] Ujiie M, Dickstein D L, Carlow D A, et al. Blood–brain barrier permeability precedes senile plaque formation in an Alzheimer disease model[J]. Microcirculation, 2003, 10(6): 463-470.

Protocol of CFDA-SE

1. Preparation of staining solution

(1) Preparation of stock solution: dissolve CFDA-SE in DMSO to prepare a stock solution, typically at a concentration of 10mM. Stock solution are recommended to be aliquoted and stored at -20°C or -80°C protected from light. Avoid repeated freeze-thaw cycles.

(2) Preparation of working solution: dilute the stock solution with serum-free medium or PBS to prepare a working solution at 1-10μM. Since CFDA-SE hydrolyzes rapidly in aqueous solutions, prepare the working solution immediately before use. Proteins present in serum and culture media compete with CFDA-SE for binding, leading to a substantial decrease in labeling efficiency. The preparation of working solutions and the labeling process must be strictly performed under serum-free conditions.

2. Staining of Suspension Cells

(1) Cell collection: centrifuge at 1000×g for 3-5min at 4℃, discard the supernatant, and wash the cells twice with pre-warmed (37℃) serum-free PBS, 5min each time.

(2) Cell density adjustment: resuspend the cells in serum-free PBS and adjust the density to 1×106-1×107cells/mL.

(3) Staining: add CFDA-SE working solution (ensure the final concentration reaches the working concentration) and mix quickly and gently.

(4) Incubation: incubate the cell suspension at 37℃ in the dark for 10-30min. The optimal incubation time varies among different cell types and should be determined empirically based on specific experimental requirements.

(5) Washing and resuspension: after incubation, centrifuge at 1000×g for 5min, discard the supernatant, and wash the cells twice with PBS, 5min each time, to remove residual free dye.

3. Staining of Adherent Cells (Suspension Labeling Method)

(1) Cell collection: remove the culture medium, wash the cells twice with PBS, and detach the cells using trypsin. After digestion, centrifuge at 1000×g for 3-5min.

(2) Follow steps (2) through (5) under "Staining of Suspension Cells".

4. Staining of Adherent Cells (In Situ Labeling Method)

(1) Plating: culture cells on plates until they reach approximately 60%-80% confluence.

(2) Washing: remove the old medium and wash the cells twice with pre-warmed serum-free PBS.

(3) Incubation: add CFDA-SE working solution to just cover the cells, according to experimental requirements. Incubate at 37℃ in the dark for 10-30min. The optimal incubation time varies among different cell types and should be determined empirically.

(4) Washing: aspirate the staining working solution and wash the cells twice with PBS.

5. Detection

Depending on the experimental purpose, detach the cells if needed, and observe under a fluorescence microscope or by flow cytometry at Ex/Em 488/518nm.

Notes:

(1) Intracellular esterase activity varies among different cell types, which may result in differential staining efficiency.

(2) Fluorescent dyes are susceptible to photobleaching. Protect from light throughout the staining procedure.

Chemical Properties of CFDA-SE

Cas No. 150347-59-4 SDF
Synonyms 5(6)Carboxyfluorescein diacetate succinimidyl ester, 5(6)-CFDA N-succinmidyl ester
Chemical Name 5-(((2,5-dioxopyrrolidin-1-yl)oxy)carbonyl)-3-oxo-3H-spiro[isobenzofuran-1,9'-xanthene]-3',6'-diyl diacetate
Canonical SMILES O=C1N(OC(C2=CC=C(C3(C(C=CC(OC(C)=O)=C4)=C4OC5=C3C=CC(OC(C)=O)=C5)OC6=O)C6=C2)=O)C(CC1)=O
Formula C29H19NO11 M.Wt 557.46
Solubility ≥ 37.2mg/mL in DMSO with ultrasonic Storage Store at -20°C, protect from light
General tips Please select the appropriate solvent to prepare the stock solution according to the solubility of the product in different solvents; once the solution is prepared, please store it in separate packages to avoid product failure caused by repeated freezing and thawing.Storage method and period of the stock solution: When stored at -80°C, please use it within 6 months; when stored at -20°C, please use it within 1 month.
To increase solubility, heat the tube to 37°C and then oscillate in an ultrasonic bath for some time.
Shipping Condition Evaluation sample solution: shipped with blue ice. All other sizes available: with RT, or with Blue Ice upon request.

Complete Stock Solution Preparation Table of CFDA-SE

Prepare stock solution
1 mg 5 mg 10 mg
1 mM 1.7939 mL 8.9693 mL 17.9385 mL
5 mM 358.8 μL 1.7939 mL 3.5877 mL
10 mM 179.4 μL 896.9 μL 1.7939 mL
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In vivo Formulation Calculator (Clear solution) of CFDA-SE

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Working concentration: mg/ml;

Method for preparing DMSO master liquid: mg drug pre-dissolved in μL DMSO ( Master liquid concentration mg/mL, Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug. )

Method for preparing in vivo formulation: Take μL DMSO master liquid, next addμL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL saline, mix and clarify.

Method for preparing in vivo formulation: Take μL DMSO master liquid, next add μL Corn oil, mix and clarify.

Note: 1. Please make sure the liquid is clear before adding the next solvent.
2. Be sure to add the solvent(s) in order. You must ensure that the solution obtained, in the previous addition, is a clear solution before proceeding to add the next solvent. Physical methods such as vortex, ultrasound or hot water bath can be used to aid dissolving.
3. All of the above co-solvents are available for purchase on the GlpBio website.

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Average Rating: 5 ★★★★★ (Based on Reviews and 20 reference(s) in Google Scholar.)

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