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Pentostatin (Synonyms: CI 825, CL 67310465, DCF, 2′-Deoxycoformycin, Deoxycoformycin, NSC 218321, NSC 247520)

Katalog-Nr.GC12200

Pentostatin (2′-deoxycoformycin, Nipent) is an adenosine deaminase inhibitor with a Ki value of 1.2pM and an IC50 value of 1.4pM.

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Pentostatin Chemische Struktur

Cas No.: 53910-25-1

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10mM (in 1mL DMSO)
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5mg
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10mg
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25mg
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50mg
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Sample solution is provided at 25 µL, 10mM.

Product has been cited by 1 publications

Description of Pentostatin

Pentostatin (2′-deoxycoformycin, Nipent) is an adenosine deaminase inhibitor with a Ki value of 1.2pM and an IC50 value of 1.4pM[1]. Pentostatin is used for hairy cell leukemia treatment, as well as another type of cancer[2]. The natural adenosine analog is produced by the bacterium Streptomyces antibioticus and the fungus Emericella nidulans[3].

In vitro, Pentostatin (100μM-1nM; 4h) inhibits the growth in soft agar of T cell colonies from PHA-stimulated human peripheral blood lymphocytes[4]. Pentostatin (1μM) also has the growth-inhibitory activity of 9-beta-D-arabinofuranosyladenine in human cultured cell lines derived from leukemias and lymphomas[5].

In vivo, Pentostatin (10μg; once; i.v) indirectly triggers Toll-like receptor 3 and enhances immune infiltration in tumors in a C57BL/6 nude mice model[6]. Pentostatin(0.16mg/kg; once per day; 7d; i.p) also shows cytotoxicity to T cells with a decrease in the number of Thy-1-positive cells in both spleen and lymph nodes in BALB/c (H-2d) mice[7]. The effect of Pentostatin(10-100μg/g; once; s.c) on the thymus was proven to be independent of the adrenal glands by the use of adrenalectomized mice[8].

References:
[1] Adamek, Rebecca N et al. “Identification of Adenosine Deaminase Inhibitors by Metal-binding Pharmacophore Screening.” *ChemMedChem*vol. 15,22 (2020): 2151-2156. doi:10.1002/cmdc.202000271
[2] “Pentostatin.” *LiverTox: Clinical and Research Information on Drug-Induced Liver Injury*, National Institute of Diabetes and Digestive and Kidney Diseases, 12 September 2020.
[3] Agarwal, R P et al. “Tight-binding inhibitors--IV. Inhibition of adenosine deaminases by various inhibitors.” *Biochemical pharmacology* vol. 26,5 (1977): 359-67. doi:10.1016/0006-2952(77)90192-7
[4] Colledge, N R et al. “Action of deoxycoformycin on human T cell colonies in vitro.” *Clinical and experimental immunology* vol. 50,1 (1982): 115-22.
[5] Kuroki, Y et al. “Potentiation of growth-inhibitory activity of 9-beta-D-arabinofuranosyladenine by 2'-deoxycoformycin in human cultured cell lines derived from leukemias and lymphomas.” *Japanese journal of cancer research : Gann* vol. 80,5 (1989): 482-9. doi:10.1111/j.1349-7006.1989.tb02340.x
[6] Tusup, Marina et al. “Epitranscriptomics modifier pentostatin indirectly triggers Toll-like receptor 3 and can enhance immune infiltration in tumors.” *Molecular therapy : the journal of the American Society of Gene Therapy* vol. 30,3 (2022): 1163-1170. doi:10.1016/j.ymthe.2021.09.022
[7] Tedde, A et al. “Animal model for immune dysfunction associated with adenosine deaminase deficiency.” *Proceedings of the National Academy of Sciences of the United States of America*vol. 77,8 (1980): 4899-903. doi:10.1073/pnas.77.8.4899
[8] Ratech, H et al. “Effects of deoxycoformycin in mice. III. A murine model reproducing multi-system pathology of human adenosine deaminase deficiency.” *The American journal of pathology* vol. 119,1 (1985): 65-72.

Protocol of Pentostatin

Kinase experiment [1]:

Preparation Method

Fresh dilutions of Pentostatin (0.005, 0.05, 0.125, 0.5, 5, 12.5, 50, 125, 500, 1000μM) in phosphate buffer were prepared. 30μL of 13.8mUmL−1 adenosine deaminase (ADA) and 20μL of Pentostatin were added to successive wells in a row and thoroughly mixed. In the final two wells of the row, phosphate buffer and EHNA were added, respectively, in place of Pentostatin. Two more rows were prepared in the same manner and a fourth row was prepared with phosphate buffer in place of ADA.

Reaction Conditions

After two minutes of incubation, isothiazolo adenosine (tzA) (50μL of 7.8μM) was added and mixed thoroughly. Wells were then excited at 322nm and emission monitored at 410nm. Intensity of emission was measured every 37 seconds for just over 30 minutes.

Applications

The IC50 value of Pentostatin is 0.0014±0.0001μM, and Ki value is 0.0012±0.0002μM

Cell experiment [2]:

Cell lines

human Primary Lymphocytes

Preparation Method

Freeze dried Pentostatin was reconstituted with PBS, resterilized by filtration and added to cultures by pipetting on to the surface of the agar. Control cultures received the same volume of saline. Pilot experiments showed that Pentostatin was much less effective when incorporated into the agar underlay than when pipetted on to the surface. Application of Pentostatin to the agar surface had the further advantage that it could be done at any time after setting up the culture. It is however difficult to be precise about drug concentrations reaching cells by diffusion through soft agar. Cited concentrations are those pipetted on to the agar surface and are therefore all over-estimates by up to 10-fold of the concentrations surrounding the cells, since the volume of saline in which the Pentostatin was applied was one tenth that of the agar in each well.

Reaction Conditions

100μM-1nM; 4h

Applications

T cells already proliferating in response to PHA are less sensitive to Pentostatin, implying that S-phase events are not primary targets of the drug's action. Colony inhibition does not appear to be due to alteration in the production of, or sensitivity to, soluble T cell growth factors. In suspension cultures, Pentostatin at concentrations up to 100μM fails to inhibit early PHA-induced volume changes, or later mitosis, in peripheral blood lymphocytes.
Animal experiment [3]:

Animal models

C57BL/6 nude mice

Preparation Method

Mice were implanted subcutaneously with CT26/NY-ESO-1 cells and received 10μg of intravenous Pentostatin alone (“Pentostatin”) or together with 1mg intraperitoneally of an anti-IFNAR antibody (“Pentostatin + anti-IFNAR ab”) 6 days later. As controls, tumor-bearing mice received only the anti-IFNAR ab (“anti-IFNAR ab”) or were left untreated (“Untreated”) at day 6.

Dosage form

10μg; once; i.v

Applications

Pentostatin can be used to treat CT26/NY-ESO-1 tumors, but its activity is abrogated by anti-IFNAR ab

References:
[1]Adamek, Rebecca N et al. “Identification of Adenosine Deaminase Inhibitors by Metal-binding Pharmacophore Screening.” ChemMedChemvol. 15,22 (2020): 2151-2156. doi:10.1002/cmdc.202000271
[2]Colledge, N R et al. “Action of deoxycoformycin on human T cell colonies in vitro.” Clinical and experimental immunology vol. 50,1 (1982): 115-22.
[3]Tusup, Marina et al. “Epitranscriptomics modifier pentostatin indirectly triggers Toll-like receptor 3 and can enhance immune infiltration in tumors.” Molecular therapy : the journal of the American Society of Gene Therapy vol. 30,3 (2022): 1163-1170. doi:10.1016/j.ymthe.2021.09.022

Chemical Properties of Pentostatin

Cas No. 53910-25-1 SDF
Überlieferungen CI 825, CL 67310465, DCF, 2′-Deoxycoformycin, Deoxycoformycin, NSC 218321, NSC 247520
Chemical Name (8R)-3-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-7,8-dihydro-4H-imidazo[4,5-d][1,3]diazepin-8-ol
Canonical SMILES C1C(C(OC1N2C=NC3=C2NC=NCC3O)CO)O
Formula C11H16N4O4 M.Wt 268.27
Löslichkeit ≥ 13.4 mg/mL in DMSO, ≥ 26.8 mg/mL in Water Storage Store at -20°C
General tips Please select the appropriate solvent to prepare the stock solution according to the solubility of the product in different solvents; once the solution is prepared, please store it in separate packages to avoid product failure caused by repeated freezing and thawing.Storage method and period of the stock solution: When stored at -80°C, please use it within 6 months; when stored at -20°C, please use it within 1 month.
To increase solubility, heat the tube to 37°C and then oscillate in an ultrasonic bath for some time.
Shipping Condition Evaluation sample solution: shipped with blue ice. All other sizes available: with RT, or with Blue Ice upon request.

Complete Stock Solution Preparation Table of Pentostatin

Prepare stock solution
1 mg 5 mg 10 mg
1 mM 3.7276 mL 18.6379 mL 37.2759 mL
5 mM 0.7455 mL 3.7276 mL 7.4552 mL
10 mM 0.3728 mL 1.8638 mL 3.7276 mL
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